plot a boxchart for a list of GRaNPA objects — plot_GRaNPA_boxplot • GRaNPA

plot a boxchart for a list of GRaNPA objects

plot_GRaNPA_boxplot(
  GRaNPA.object_list,
  output,
  name_list,
  plot_name = "",
  width = 4,
  height = 4,
  xangle = 90
)

Arguments

GRaNPA.object_list: GRaNPA object, An output from GRaNPA main function.
name_list: a list contains name of GRaNPA object.
plot_name: Exact name of the plot
width: width of the plot which be used by ggsave
height: height of the plot which be used by ggsave
xangle: the angle of GRaNPA object names. Default is 90
outputFolder: Absolute file path. No default.

Value

The final boxplot plot

Examples

plot_GRaNPA_boxplot(GRaNPA.object_list, "your/path/" , name_list, "GRN_names" , width = 8, height = 6)
#> Error in plot_GRaNPA_boxplot(GRaNPA.object_list, "your/path/", name_list,     "GRN_names", width = 8, height = 6): object 'GRaNPA.object_list' not found